BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038E05SP1|AL430553
(961 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1622 1902 0.0
>3x_Contig1622
Length = 13445
Score = 1902 bits (959), Expect = 0.0
Identities = 960/961 (99%)
Strand = Plus / Minus
Query: 1 gatccttctacggatcatattctcgagagtttctgttacctcagctgttataactggcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12411 gatccttctacggatcatattctcgagagtttctgttacctcagctgttataactggcac 12352
Query: 61 aggtttggcagttctttcgaactcaagatcttccgttaacaaggcatcttctggcctatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12351 aggtttggcagttctttcgaactcaagatcttccgttaacaaggcatcttctggcctatc 12292
Query: 121 gcgagcttttacttcaccttttaacgcccatttcttctcagcaacagcttccttttcgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12291 gcgagcttttacttcaccttttaacgcccatttcttctcagcaacagcttccttttcgag 12232
Query: 181 ggattctatttgtctttttagctcaagttgttgacgttcaaaggtagataatggttgttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12231 ggattctatttgtctttttagctcaagttgttgacgttcaaaggtagataatggttgttc 12172
Query: 241 agcagtttcttcatctgatccctgaaaatcatcgtcttcgtcagcaaaaagatctaactt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12171 agcagtttcttcatctgatccctgaaaatcatcgtcttcgtcagcaaaaagatctaactt 12112
Query: 301 agcttcctccattgcatcatcatactcgctttcgtcaaaggattcatcctcttcggcctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12111 agcttcctccattgcatcatcatactcgctttcgtcaaaggattcatcctcttcggcctc 12052
Query: 361 tgctttctttgaaggtcctggccgcctgtcctgggaagattttttattagatggcttatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12051 tgctttctttgaaggtcctggccgcctgtcctgggaagattttttattagatggcttatc 11992
Query: 421 aaagaaatcgtcgtaatatagagcttcttcatcttcctccgatggaacatctgcgaaata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11991 aaagaaatcgtcgtaatatagagcttcttcatcttcctccgatggaacatctgcgaaata 11932
Query: 481 atcaacttcttcgtcatcctcatcttcttcatctgcatcttggcttctattctcagcctc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11931 atcaacttcttcgtcatcctcatcttcttcatctgcatcttggcttctattctcagcctc 11872
Query: 541 aagtgtttgtctattgaattcatctagattgaaaaattgatcgtttacaccaaacttgtc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11871 aagtgtttgtctattgaattcatctagattgaaaaattgatcgtttacaccaaacttgtc 11812
Query: 601 ttcgatcgcttgtggactttcttgtgcttctacaaattgatcatcaggttccgaatcact 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11811 ttcgatcgcttgtggactttcttgtgcttctacaaattgatcatcaggttccgaatcact 11752
Query: 661 ttcgttttccaatttatcttcttccttctcatgtaattctaaaggttctggttctgagaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11751 ttcgttttccaatttatcttcttccttctcatgtaattctaaaggttctggttctgagaa 11692
Query: 721 ctgttgttcttcatctaaaacgagctcttcattttctgcttcttcctcctcctcttcaat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11691 ctgttgttcttcatctaaaacgagctcttcattttctgcttcttcctcctcctcttcaat 11632
Query: 781 agcagactcttcagaaactggagcttcgtctgcagacatttcattggaattttcaacatt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11631 agcagactcttcagaaactggagcttcgtctgcagacatttcattggaattttcaacatt 11572
Query: 841 agaggcatcatcttcgtctccgctgctttcctcgctcatatcattctcattatcaacctt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11571 agaggcatcatcttcgtctccgctgctttcctcgctcatatcattctcattatcaacctt 11512
Query: 901 cagttcggcgattttttccatgatatcacyttgaacattatctaaaatgatttttgactg 960
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 11511 cagttcggcgattttttccatgatatcaccttgaacattatctaaaatgatttttgactg 11452
Query: 961 c 961
|
Sbjct: 11451 c 11451
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9772
Number of Sequences: 1807
Number of extensions: 9772
Number of successful extensions: 136
Number of sequences better than 1.0e-20: 1
length of query: 961
length of database: 10,358,551
effective HSP length: 16
effective length of query: 945
effective length of database: 10,329,639
effective search space: 9761508855
effective search space used: 9761508855
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)